Download binding sites datasets

Subset
Description/Source
Compound
Cofactor
All
Human
Human proteins determined as those where source organism listed in the PDB file is HOMO SAPIENS
Human cancer-related
Human proteins that correspond to genes in the Human Protein Atlas and match the search terms »protein class COSMIC somatic mutations in cancer genes«
Human protein kinases
Human proteins with EC numbers: 2.7.10.*, 2.7.11.*, 2.7.12.*, 2.7.13.*, 2.7.99.*
Animals
Proteins corresponding to NCBI taxonomy division names: invertebrates, vertebrates, mammals, primates, rodents
Bacteria
Proteins corresponding to NCBI taxonomy division name: bacteria
Pathogenic bacteria
Proteins whose source organism listed in their PDB file corresponds to one of the following: Bacillus anthracis, Bacillus cereus, Bartonella henselae, Bartonella quintana, Bordetella pertussis, Borrelia burgdorferi, Borrelia garinii, Borrelia afzelii, Borrelia recurrentis, Brucella abortus, Brucella...
Viruses
Proteins corresponding to NCBI taxonomy division name: viruses
Plants and fungi
Proteins corresponding to NCBI taxonomy division name: plants and fungi